Alonso Ramírez Manzanares, Publicaciones/Publications
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Journal/Revista
Alonso Ramirez-Manzanares, Philip A. Cook, Matt
Hall, Manzar Ashtari and James C. Gee. Resolving
Axon Fiber Crossings at Clinical b-values: An Evaluation
Study, Journal of Medical Physics, Volume 38, Issue 9,
5239-53 , Sep. 2011
A. Ramirez-Manzanares, M. Rivera, P. Kornprobst and F.
Lauze. Variational multi-valued velocity field estimation
for transparent sequences, Journal of Mathematical Imaging
and Vision, Volume 40, Issue 3, 285-304 , July 2011.
P. Fillard, M. Descoteaux, A. Goh, S. Gouttard, B.
Jeurissen, J. Malcolm, A. Ramirez-Manzanares, M. Reisert, K.
Sakaie, F. Tensaouti, T. Yo, J. F. Mangin, C. Poupon.
Quantitative Evaluation of 10 Tractography Algorithms on a
Realistic Diffusion MR Phantom, Neuroimage, Volume 56, Issue
1, 220-234, May 2011
M. Rivera, O. Dalmau, W. Mio, and A.
Ramírez-Manzanares, Spatial Sampling for Image
Segmentation. Oxford Journals: The computer Journal,
Published online, DOI 10.1093/comjnl/bxr032, 2011
A. Ramirez-Manzanares, M.
Rivera, B. C. Vemuri, P. Carney and T. Mareci. Diffusion
Basis Functions Decomposition for Estimating White Matter
Intra-voxel Fiber Geometry. IEEE Transactions on Medical
Imaging, August, vol. 26, no. 8. Pp. 1091-1102, 2007
DOWNLOAD the Matlab Toolbox and Synthetic data for testing.
A. Ramirez-Manzanares and M. Rivera. Basis Tensor Decomposition for Restoring Intra-Voxel Structure and Stochastic Walks for inferring Brain Connectivity DT-MRI. International Journal of Computer Vision 69(1), pp. 77-92, 2006.
Congress/Congresos
A. Ramirez-Manzanares, A. Palafox-Gonzalez, M. Rivera: Robust Spatial Regularization and Velocity Layer Separation for Optical Flow Computation on Transparent Sequences. Advances in Artificial Intelligence, Lecture Notes in Computer Science, 2010, Volume 6437/2010 : 325-336 DOI: 10.1007/978-3-642-16761-4_29
Ramón Aranda,
Mariano Rivera, Alonso Ramírez-Manzanares,
Manzar Ashtari and James C. Gee, Massive
Particles for Brain Tractography, Advances in
Artificial Intelligence, Lecture Notes in Computer
Science, 2010, Volume 6437/2010, 446-457, DOI:
10.1007/978-3-642-16761-4_39
A.
Ramírez-Manzanares, J. Rafael-Patiño, M.
Ashtari, Single and Multi Diffusion-Tensor Based
Kernels for Anisotropic Filtering of Brain DW-MR
Images, IEEE Electronics, Robotics and Automotive
Mechanics Conference, pp.399-404, 2010
E. Hernandez, T. Cordova, A. Ramírez-Manzanares, D. K. B. Li, M. F. Dvorak, A. Curt, E. L. MacMillan, B. Mädler, A. L. Mackay. Pitfalls of Spinal DTI in Cervical Spondylotic Myelopathy. Annual Meeting ISMRM, 1-7 May 2010, Stockholm, Sweden.
A. Ramirez-Manzanares,
M. Rivera, and J. C. Gee. Denoising Intra-voxel Axon
Fiber Orientations by Means of EC-QMMF Method. In 8th
Mexican International Conference on Artificial
Intelligence 11-Nov-2009, Guanajuato, LNCS. Pp.
303-311.
A. Ramirez-Manzanares, P. A. Cook, and J. C.
Gee. A comparison of methods for recovering
intra-voxel white matter fiber architecture from
clinical diffusion imaging scans. In Med Image
Comput Comput Assist Interv (New York, USA, Sep
2008), vol. 5241 of Lecture Notes in Computer
Science, Springer Berlin / Heidelberg, pp. 305-312.
A. Ramirez-Manzanares, H. Zhang,
M. Rivera, and J. C. Gee. Robust regularization
for the estimation of intra-voxel axon fiber
orientations. In Workshop Math Methods in Biomed
Imag Anal (Anchorage, Alaska, Jun 2008), pp. 1-8.
A.
Ramirez-Manzanares, M. Rivera, P. Kornprobst and
F. Lauze. A Variational Approach for
Multi-Valued Velocity Field Estimation in
Transparent Sequences. In Proc. 1st
International Conference on Scale Space and
Variational Methods in Computer Vision. LNCS
4485, pp. 227-238. May. Ischia, Italy, 2007.
PDF
A.
Ramirez-Manzanares and M. Rivera, "Basis
Pursuit based algorithm for intra-voxel
recovering information in DW-MR," Procc. IEEE
Sixth Mexican International Conference on
Computer Science (ENC'05), pp. 152-157, Puebla,
México, 2005. PDF
A.
Ramirez-Manzanares, M. Rivera, B.C. Vemuri and
T. Mareci. Basis Functions for Estimating
Intra–voxel Structure in DW–MRI. Procc. IEEE
Medical Imaging Conference 2004, Rome, Italy, Pp
4207- 4211, October 2004. Digital Object
Identifier 10.1109/NSSMIC.2004.1466819. PDF
A.
Ramirez-Manzanares, M. Rivera. Brain Nerve
Bundles Estimation by Restoring and Filtering
Intra-Voxel Information in Diffusion Tensor MRI.
VLSM 2003. Nice France, October 2003, pp. 71-80.
PDF
Research Reports/Reportes de Investigación
A. Ramirez-Manzanares, M.
Rivera, P. Kornprobst and F. Lauze.
Multi-Valued Motion Fields Estimation for
Transparent Sequences with a Variational
Approach. Reporte Técnico del CIMAT,
number 22.06.2006,
I-06-12
(CC).
2006.
A.
Ramirez-Manzanares, M. Rivera, P. Kornprobst, F.
Lauze. Multi-Valued Motion Fields Estimation for
Transparent Sequences with a Variational
Approach. Rapport De Recherche Inria, number
RR-5920. 2006. [ Download Research
Report ]
A. Ramirez-Manzanares, M.
Rivera, B. C. Vemuri and T. Mareci. Basis
functions for estimating intra-voxel structure
in DW-MRI. Reporte Técnico del CIMAT,
number 18.10.2004,
I-04-10
(CC).
2004.
Thesis/Tesis
A. Ramirez-Manzanares For
the degree of Doctor of Sciences at the Centro de
Investigacion en Matematicas A.C., June 2007. PDF